Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.14■□□□□ 0.49
LmnaP48678 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.14■□□□□ 0.49
LmnaP48678 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Gm33142-201ENSMUST00000193913 867 ntBASIC18.14■□□□□ 0.49
LmnaP48678 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LmnaP48678 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.14■□□□□ 0.49
LmnaP48678 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LmnaP48678 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.13■□□□□ 0.49
LmnaP48678 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.13■□□□□ 0.49
LmnaP48678 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Gm9103-201ENSMUST00000119371 405 ntBASIC18.13■□□□□ 0.49
LmnaP48678 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.13■□□□□ 0.49
LmnaP48678 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.13■□□□□ 0.49
LmnaP48678 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
LmnaP48678 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Flg-201ENSMUST00000050758 1488 ntBASIC18.13■□□□□ 0.49
LmnaP48678 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LmnaP48678 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LmnaP48678 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LmnaP48678 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LmnaP48678 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LmnaP48678 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LmnaP48678 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.11■□□□□ 0.49
LmnaP48678 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.11■□□□□ 0.49
LmnaP48678 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.11■□□□□ 0.49
LmnaP48678 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LmnaP48678 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.11■□□□□ 0.49
LmnaP48678 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.11■□□□□ 0.49
LmnaP48678 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LmnaP48678 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.1■□□□□ 0.49
LmnaP48678 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.1■□□□□ 0.49
LmnaP48678 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.1■□□□□ 0.49
LmnaP48678 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 AA414768-201ENSMUST00000121924 1257 ntBASIC18.1■□□□□ 0.49
LmnaP48678 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.1■□□□□ 0.49
LmnaP48678 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.1■□□□□ 0.49
LmnaP48678 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.1■□□□□ 0.49
LmnaP48678 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LmnaP48678 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LmnaP48678 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LmnaP48678 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LmnaP48678 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms