Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vps4bP46467 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Gm12441-201ENSMUST00000121806 588 ntBASIC17.79■□□□□ 0.44
Vps4bP46467 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps4bP46467 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.79■□□□□ 0.44
Vps4bP46467 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.79■□□□□ 0.44
Vps4bP46467 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vps4bP46467 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Vps4bP46467 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps4bP46467 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps4bP46467 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.78■□□□□ 0.44
Vps4bP46467 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps4bP46467 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps4bP46467 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Vps4bP46467 Gm13148-201ENSMUST00000118892 745 ntBASIC17.78■□□□□ 0.44
Vps4bP46467 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps4bP46467 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps4bP46467 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vps4bP46467 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.78■□□□□ 0.44
Vps4bP46467 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps4bP46467 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Vps4bP46467 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.77■□□□□ 0.44
Vps4bP46467 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps4bP46467 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps4bP46467 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps4bP46467 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Vps4bP46467 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.77■□□□□ 0.43
Vps4bP46467 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.77■□□□□ 0.43
Vps4bP46467 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps4bP46467 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps4bP46467 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.76■□□□□ 0.43
Vps4bP46467 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps4bP46467 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps4bP46467 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
Vps4bP46467 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.76■□□□□ 0.43
Vps4bP46467 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps4bP46467 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps4bP46467 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps4bP46467 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vps4bP46467 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Vps4bP46467 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Vps4bP46467 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.75■□□□□ 0.43
Vps4bP46467 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.75■□□□□ 0.43
Vps4bP46467 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vps4bP46467 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps4bP46467 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms