Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm26524-201ENSMUST00000192339 390 ntBASIC18.07■□□□□ 0.48
Msh2P43247 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Msh2P43247 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Msh2P43247 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh2P43247 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.06■□□□□ 0.48
Msh2P43247 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Msh2P43247 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.06■□□□□ 0.48
Msh2P43247 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.06■□□□□ 0.48
Msh2P43247 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh2P43247 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.05■□□□□ 0.48
Msh2P43247 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.05■□□□□ 0.48
Msh2P43247 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Msh2P43247 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.05■□□□□ 0.48
Msh2P43247 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.05■□□□□ 0.48
Msh2P43247 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Msh2P43247 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh2P43247 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh2P43247 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Msh2P43247 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.04■□□□□ 0.48
Msh2P43247 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Msh2P43247 Rab3c-203ENSMUST00000224180 967 ntBASIC18.04■□□□□ 0.48
Msh2P43247 Gm4968-201ENSMUST00000071458 858 ntBASIC18.04■□□□□ 0.48
Msh2P43247 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh2P43247 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Msh2P43247 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh2P43247 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Idnk-204ENSMUST00000226010 1898 ntBASIC18.03■□□□□ 0.48
Msh2P43247 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
Msh2P43247 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.03■□□□□ 0.48
Msh2P43247 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Msh2P43247 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Msh2P43247 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Msh2P43247 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh2P43247 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh2P43247 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Msh2P43247 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh2P43247 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh2P43247 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Msh2P43247 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh2P43247 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.02■□□□□ 0.48
Msh2P43247 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Msh2P43247 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh2P43247 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh2P43247 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh2P43247 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh2P43247 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Msh2P43247 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms