Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.52□□□□□ -0.09
Abca1P41233 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Abca1P41233 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca1P41233 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Abca1P41233 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Abca1P41233 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.51□□□□□ -0.09
Abca1P41233 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.51□□□□□ -0.09
Abca1P41233 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Abca1P41233 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Abca1P41233 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.51□□□□□ -0.09
Abca1P41233 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca1P41233 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Abca1P41233 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.5□□□□□ -0.09
Abca1P41233 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Abca1P41233 Gm17971-201ENSMUST00000190239 806 ntBASIC14.5□□□□□ -0.09
Abca1P41233 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Abca1P41233 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Abca1P41233 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Abca1P41233 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Gm38027-201ENSMUST00000192315 235 ntBASIC14.5□□□□□ -0.09
Abca1P41233 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.5□□□□□ -0.09
Abca1P41233 Grk6-206ENSMUST00000224995 2971 ntBASIC14.5□□□□□ -0.09
Abca1P41233 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca1P41233 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Abca1P41233 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.49□□□□□ -0.09
Abca1P41233 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.49□□□□□ -0.09
Abca1P41233 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.49□□□□□ -0.09
Abca1P41233 Rarb-207ENSMUST00000225921 2756 ntBASIC14.49□□□□□ -0.09
Abca1P41233 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Abca1P41233 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Abca1P41233 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.49□□□□□ -0.09
Abca1P41233 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Abca1P41233 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.49□□□□□ -0.09
Abca1P41233 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abca1P41233 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Gm7284-201ENSMUST00000131667 944 ntBASIC14.48□□□□□ -0.09
Abca1P41233 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
Abca1P41233 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.48□□□□□ -0.09
Abca1P41233 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Abca1P41233 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms