Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VhlP40338 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VhlP40338 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.41□□□□□ -0.1
VhlP40338 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VhlP40338 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.41□□□□□ -0.1
VhlP40338 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VhlP40338 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VhlP40338 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
VhlP40338 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.4□□□□□ -0.1
VhlP40338 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.4□□□□□ -0.1
VhlP40338 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VhlP40338 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Haglr-201ENSMUST00000100000 2085 ntBASIC14.4□□□□□ -0.1
VhlP40338 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
VhlP40338 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VhlP40338 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.39□□□□□ -0.11
VhlP40338 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.39□□□□□ -0.11
VhlP40338 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.39□□□□□ -0.11
VhlP40338 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VhlP40338 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VhlP40338 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VhlP40338 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.38□□□□□ -0.11
VhlP40338 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.38□□□□□ -0.11
VhlP40338 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Gm10418-201ENSMUST00000100943 576 ntBASIC14.38□□□□□ -0.11
VhlP40338 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.38□□□□□ -0.11
VhlP40338 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.38□□□□□ -0.11
VhlP40338 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VhlP40338 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.38□□□□□ -0.11
VhlP40338 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.38□□□□□ -0.11
VhlP40338 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VhlP40338 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VhlP40338 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VhlP40338 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VhlP40338 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.37□□□□□ -0.11
VhlP40338 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
VhlP40338 Mir8112-201ENSMUST00000184382 131 ntBASIC14.37□□□□□ -0.11
VhlP40338 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VhlP40338 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VhlP40338 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms