Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.09■□□□□ 0.49
Cxcl12P40224 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.09■□□□□ 0.49
Cxcl12P40224 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Cxcl12P40224 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.09■□□□□ 0.49
Cxcl12P40224 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cxcl12P40224 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcl12P40224 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcl12P40224 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl12P40224 Gm12895-201ENSMUST00000122214 226 ntBASIC18.08■□□□□ 0.48
Cxcl12P40224 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.08■□□□□ 0.48
Cxcl12P40224 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl12P40224 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.08■□□□□ 0.48
Cxcl12P40224 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl12P40224 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl12P40224 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Gm10052-201ENSMUST00000168019 960 ntBASIC18.07■□□□□ 0.48
Cxcl12P40224 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cxcl12P40224 Gm18206-201ENSMUST00000207027 926 ntBASIC18.07■□□□□ 0.48
Cxcl12P40224 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Gm7729-201ENSMUST00000050143 801 ntBASIC18.07■□□□□ 0.48
Cxcl12P40224 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl12P40224 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cxcl12P40224 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Cxcl12P40224 Gm15794-201ENSMUST00000120182 631 ntBASIC18.06■□□□□ 0.48
Cxcl12P40224 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.06■□□□□ 0.48
Cxcl12P40224 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.06■□□□□ 0.48
Cxcl12P40224 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.06■□□□□ 0.48
Cxcl12P40224 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cxcl12P40224 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cxcl12P40224 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.06■□□□□ 0.48
Cxcl12P40224 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl12P40224 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.05■□□□□ 0.48
Cxcl12P40224 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.05■□□□□ 0.48
Cxcl12P40224 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.05■□□□□ 0.48
Cxcl12P40224 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl12P40224 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.04■□□□□ 0.48
Cxcl12P40224 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl12P40224 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl12P40224 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl12P40224 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl12P40224 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Cxcl12P40224 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl12P40224 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms