Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Fen1P39749 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.64■□□□□ 0.41
Fen1P39749 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.64■□□□□ 0.41
Fen1P39749 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Fen1P39749 Gm13534-201ENSMUST00000121169 513 ntBASIC17.64■□□□□ 0.41
Fen1P39749 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.64■□□□□ 0.41
Fen1P39749 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fen1P39749 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.63■□□□□ 0.41
Fen1P39749 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Fen1P39749 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Fen1P39749 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
Fen1P39749 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.63■□□□□ 0.41
Fen1P39749 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.63■□□□□ 0.41
Fen1P39749 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fen1P39749 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.62■□□□□ 0.41
Fen1P39749 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Fen1P39749 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Gm10493-201ENSMUST00000097270 612 ntBASIC17.62■□□□□ 0.41
Fen1P39749 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Fen1P39749 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fen1P39749 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.62■□□□□ 0.41
Fen1P39749 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Fen1P39749 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Fen1P39749 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.61■□□□□ 0.41
Fen1P39749 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Fen1P39749 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Fen1P39749 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fen1P39749 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Fen1P39749 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Fen1P39749 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Fen1P39749 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.6■□□□□ 0.41
Fen1P39749 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Gm42569-201ENSMUST00000200539 472 ntBASIC17.6■□□□□ 0.41
Fen1P39749 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.6■□□□□ 0.41
Fen1P39749 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
Fen1P39749 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.6■□□□□ 0.41
Fen1P39749 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fen1P39749 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms