Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.22■□□□□ 0.19
Foxa1P35582 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Foxa1P35582 Gm10812-201ENSMUST00000099864 546 ntBASIC16.22■□□□□ 0.19
Foxa1P35582 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.21■□□□□ 0.19
Foxa1P35582 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.21■□□□□ 0.19
Foxa1P35582 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Foxa1P35582 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Foxa1P35582 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Foxa1P35582 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Foxa1P35582 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa1P35582 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.21■□□□□ 0.19
Foxa1P35582 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.21■□□□□ 0.19
Foxa1P35582 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Foxa1P35582 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Foxa1P35582 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Foxa1P35582 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.2■□□□□ 0.18
Foxa1P35582 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.2■□□□□ 0.18
Foxa1P35582 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.2■□□□□ 0.18
Foxa1P35582 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.2■□□□□ 0.18
Foxa1P35582 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.2■□□□□ 0.18
Foxa1P35582 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Foxa1P35582 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.2■□□□□ 0.18
Foxa1P35582 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Foxa1P35582 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa1P35582 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.19■□□□□ 0.18
Foxa1P35582 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Foxa1P35582 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.19■□□□□ 0.18
Foxa1P35582 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Foxa1P35582 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.19■□□□□ 0.18
Foxa1P35582 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.19■□□□□ 0.18
Foxa1P35582 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.19■□□□□ 0.18
Foxa1P35582 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Foxa1P35582 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Foxa1P35582 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.19■□□□□ 0.18
Foxa1P35582 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxa1P35582 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Foxa1P35582 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Foxa1P35582 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Foxa1P35582 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.18■□□□□ 0.18
Foxa1P35582 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Foxa1P35582 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.18■□□□□ 0.18
Foxa1P35582 Mir8112-201ENSMUST00000184382 131 ntBASIC16.18■□□□□ 0.18
Foxa1P35582 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Foxa1P35582 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxa1P35582 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.17■□□□□ 0.18
Foxa1P35582 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Foxa1P35582 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.17■□□□□ 0.18
Foxa1P35582 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms