Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Col2a1P28481 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.96■□□□□ 0.79
Col2a1P28481 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col2a1P28481 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col2a1P28481 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Col2a1P28481 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col2a1P28481 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col2a1P28481 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.95■□□□□ 0.78
Col2a1P28481 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.95■□□□□ 0.78
Col2a1P28481 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col2a1P28481 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Col2a1P28481 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col2a1P28481 Gm11355-201ENSMUST00000121120 306 ntBASIC19.94■□□□□ 0.78
Col2a1P28481 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.94■□□□□ 0.78
Col2a1P28481 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col2a1P28481 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Col2a1P28481 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col2a1P28481 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col2a1P28481 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col2a1P28481 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col2a1P28481 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 Gm26039-201ENSMUST00000158152 144 ntBASIC19.93■□□□□ 0.78
Col2a1P28481 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Col2a1P28481 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Col2a1P28481 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col2a1P28481 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Col2a1P28481 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.93■□□□□ 0.78
Col2a1P28481 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
Col2a1P28481 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Col2a1P28481 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Gm27000-201ENSMUST00000182943 842 ntBASIC19.92■□□□□ 0.78
Col2a1P28481 Gm29518-201ENSMUST00000190858 372 ntBASIC19.92■□□□□ 0.78
Col2a1P28481 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.92■□□□□ 0.78
Col2a1P28481 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col2a1P28481 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col2a1P28481 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col2a1P28481 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col2a1P28481 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col2a1P28481 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Col2a1P28481 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.91■□□□□ 0.78
Col2a1P28481 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col2a1P28481 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Col2a1P28481 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col2a1P28481 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.9■□□□□ 0.78
Col2a1P28481 Gm37722-201ENSMUST00000193757 208 ntBASIC19.9■□□□□ 0.78
Col2a1P28481 Gm8969-201ENSMUST00000199694 526 ntBASIC19.9■□□□□ 0.78
Col2a1P28481 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col2a1P28481 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col2a1P28481 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Col2a1P28481 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col2a1P28481 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col2a1P28481 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col2a1P28481 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms