Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6aP27664 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pde6aP27664 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.32■□□□□ 0.84
Pde6aP27664 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pde6aP27664 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.32■□□□□ 0.84
Pde6aP27664 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6aP27664 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.31■□□□□ 0.84
Pde6aP27664 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Pde6aP27664 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Gm12085-201ENSMUST00000119263 940 ntBASIC20.31■□□□□ 0.84
Pde6aP27664 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.31■□□□□ 0.84
Pde6aP27664 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pde6aP27664 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6aP27664 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pde6aP27664 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.3■□□□□ 0.84
Pde6aP27664 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.3■□□□□ 0.84
Pde6aP27664 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.3■□□□□ 0.84
Pde6aP27664 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.3■□□□□ 0.84
Pde6aP27664 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Pde6aP27664 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.3■□□□□ 0.84
Pde6aP27664 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6aP27664 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pde6aP27664 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.29■□□□□ 0.84
Pde6aP27664 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.29■□□□□ 0.84
Pde6aP27664 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.29■□□□□ 0.84
Pde6aP27664 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.29■□□□□ 0.84
Pde6aP27664 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pde6aP27664 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.29■□□□□ 0.84
Pde6aP27664 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.29■□□□□ 0.84
Pde6aP27664 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Gm10252-201ENSMUST00000209541 832 ntBASIC20.29■□□□□ 0.84
Pde6aP27664 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.29■□□□□ 0.84
Pde6aP27664 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pde6aP27664 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6aP27664 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.28■□□□□ 0.84
Pde6aP27664 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.28■□□□□ 0.84
Pde6aP27664 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Pde6aP27664 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.28■□□□□ 0.84
Pde6aP27664 Gm21814-202ENSMUST00000203277 873 ntBASIC20.28■□□□□ 0.84
Pde6aP27664 Timm23-208ENSMUST00000226683 750 ntBASIC20.28■□□□□ 0.84
Pde6aP27664 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.28■□□□□ 0.84
Pde6aP27664 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pde6aP27664 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pde6aP27664 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Pde6aP27664 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Pde6aP27664 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6aP27664 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pde6aP27664 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms