Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irf8P23611 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.92■□□□□ 0.62
Irf8P23611 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irf8P23611 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.92■□□□□ 0.62
Irf8P23611 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Irf8P23611 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Irf8P23611 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Irf8P23611 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.91■□□□□ 0.62
Irf8P23611 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.91■□□□□ 0.62
Irf8P23611 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Irf8P23611 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.91■□□□□ 0.62
Irf8P23611 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf8P23611 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.91■□□□□ 0.62
Irf8P23611 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf8P23611 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf8P23611 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.9■□□□□ 0.62
Irf8P23611 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Irf8P23611 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Irf8P23611 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf8P23611 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf8P23611 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Irf8P23611 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Irf8P23611 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Irf8P23611 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Irf8P23611 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Irf8P23611 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Irf8P23611 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.89■□□□□ 0.61
Irf8P23611 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.89■□□□□ 0.61
Irf8P23611 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Irf8P23611 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.89■□□□□ 0.61
Irf8P23611 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.89■□□□□ 0.61
Irf8P23611 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.89■□□□□ 0.61
Irf8P23611 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.89■□□□□ 0.61
Irf8P23611 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Irf8P23611 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Irf8P23611 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf8P23611 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.88■□□□□ 0.61
Irf8P23611 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.88■□□□□ 0.61
Irf8P23611 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.88■□□□□ 0.61
Irf8P23611 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.88■□□□□ 0.61
Irf8P23611 Timm23-208ENSMUST00000226683 750 ntBASIC18.88■□□□□ 0.61
Irf8P23611 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Irf8P23611 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Irf8P23611 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Irf8P23611 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf8P23611 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf8P23611 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Irf8P23611 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf8P23611 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf8P23611 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.87■□□□□ 0.61
Irf8P23611 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf8P23611 Odf3b-204ENSMUST00000227834 930 ntBASIC18.87■□□□□ 0.61
Irf8P23611 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf8P23611 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf8P23611 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Irf8P23611 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms