Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
BdnfP21237 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.77■□□□□ 0.28
BdnfP21237 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.77■□□□□ 0.28
BdnfP21237 Gm8495-201ENSMUST00000188740 694 ntBASIC16.77■□□□□ 0.28
BdnfP21237 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.77■□□□□ 0.28
BdnfP21237 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.77■□□□□ 0.28
BdnfP21237 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BdnfP21237 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BdnfP21237 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
BdnfP21237 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BdnfP21237 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.76■□□□□ 0.27
BdnfP21237 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BdnfP21237 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BdnfP21237 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.75■□□□□ 0.27
BdnfP21237 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BdnfP21237 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.75■□□□□ 0.27
BdnfP21237 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BdnfP21237 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BdnfP21237 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.74■□□□□ 0.27
BdnfP21237 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BdnfP21237 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BdnfP21237 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
BdnfP21237 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.73■□□□□ 0.27
BdnfP21237 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms