Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Mtag2-201ENSMUST00000058665 714 ntBASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf9P20334 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.24□□□□□ -0.13
Tnfrsf9P20334 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Gm27741-201ENSMUST00000185060 237 ntBASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfrsf9P20334 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Gm6659-201ENSMUST00000174752 547 ntBASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Flg-201ENSMUST00000050758 1488 ntBASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.23□□□□□ -0.13
Tnfrsf9P20334 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tnfrsf9P20334 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gm11539-201ENSMUST00000119837 557 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gm13436-201ENSMUST00000120418 567 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gm43183-201ENSMUST00000200632 547 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.22□□□□□ -0.13
Tnfrsf9P20334 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms