Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srp54P14576 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.22■□□□□ 0.35
Srp54P14576 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.22■□□□□ 0.35
Srp54P14576 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.22■□□□□ 0.35
Srp54P14576 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp54P14576 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.22■□□□□ 0.35
Srp54P14576 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp54P14576 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Srp54P14576 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp54P14576 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.21■□□□□ 0.35
Srp54P14576 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Srp54P14576 Gm10418-201ENSMUST00000100943 576 ntBASIC17.21■□□□□ 0.35
Srp54P14576 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.21■□□□□ 0.35
Srp54P14576 Gm11539-201ENSMUST00000119837 557 ntBASIC17.21■□□□□ 0.35
Srp54P14576 Gm13436-201ENSMUST00000120418 567 ntBASIC17.21■□□□□ 0.35
Srp54P14576 Gm13559-201ENSMUST00000120476 863 ntBASIC17.21■□□□□ 0.35
Srp54P14576 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.21■□□□□ 0.35
Srp54P14576 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Srp54P14576 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp54P14576 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Srp54P14576 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.2■□□□□ 0.34
Srp54P14576 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.2■□□□□ 0.34
Srp54P14576 Gm4974-201ENSMUST00000209974 875 ntBASIC17.2■□□□□ 0.34
Srp54P14576 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.2■□□□□ 0.34
Srp54P14576 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.2■□□□□ 0.34
Srp54P14576 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srp54P14576 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.19■□□□□ 0.34
Srp54P14576 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.19■□□□□ 0.34
Srp54P14576 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.19■□□□□ 0.34
Srp54P14576 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Srp54P14576 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Srp54P14576 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srp54P14576 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Srp54P14576 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Srp54P14576 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.18■□□□□ 0.34
Srp54P14576 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Srp54P14576 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Srp54P14576 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Srp54P14576 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Srp54P14576 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Gm10231-201ENSMUST00000181584 441 ntBASIC17.17■□□□□ 0.34
Srp54P14576 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.17■□□□□ 0.34
Srp54P14576 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.17■□□□□ 0.34
Srp54P14576 Gm10175-202ENSMUST00000208752 441 ntBASIC17.17■□□□□ 0.34
Srp54P14576 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Srp54P14576 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Srp54P14576 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms