Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cntn1P12960 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cntn1P12960 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Cntn1P12960 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cntn1P12960 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cntn1P12960 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cntn1P12960 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cntn1P12960 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.81■□□□□ 0.28
Cntn1P12960 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cntn1P12960 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.81■□□□□ 0.28
Cntn1P12960 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cntn1P12960 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cntn1P12960 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cntn1P12960 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cntn1P12960 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.8■□□□□ 0.28
Cntn1P12960 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.8■□□□□ 0.28
Cntn1P12960 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Gm43799-201ENSMUST00000201845 579 ntBASIC16.8■□□□□ 0.28
Cntn1P12960 Gm4974-201ENSMUST00000209974 875 ntBASIC16.8■□□□□ 0.28
Cntn1P12960 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.8■□□□□ 0.28
Cntn1P12960 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.8■□□□□ 0.28
Cntn1P12960 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cntn1P12960 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.79■□□□□ 0.28
Cntn1P12960 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cntn1P12960 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cntn1P12960 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.78■□□□□ 0.28
Cntn1P12960 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.78■□□□□ 0.28
Cntn1P12960 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.78■□□□□ 0.28
Cntn1P12960 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cntn1P12960 Gm13836-201ENSMUST00000121159 501 ntBASIC16.78■□□□□ 0.28
Cntn1P12960 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.78■□□□□ 0.28
Cntn1P12960 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cntn1P12960 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cntn1P12960 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms