Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Gm11950-201ENSMUST00000121615 838 ntBASIC19.48■□□□□ 0.71
Hoxc6P10629 Gm18958-201ENSMUST00000174258 762 ntBASIC19.48■□□□□ 0.71
Hoxc6P10629 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.48■□□□□ 0.71
Hoxc6P10629 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Hoxc6P10629 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.47■□□□□ 0.71
Hoxc6P10629 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxc6P10629 Gm26039-201ENSMUST00000158152 144 ntBASIC19.47■□□□□ 0.71
Hoxc6P10629 Gm27357-201ENSMUST00000183754 135 ntBASIC19.47■□□□□ 0.71
Hoxc6P10629 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Hoxc6P10629 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxc6P10629 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc6P10629 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Hoxc6P10629 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc6P10629 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Hoxc6P10629 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.45■□□□□ 0.7
Hoxc6P10629 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hoxc6P10629 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc6P10629 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc6P10629 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.44■□□□□ 0.7
Hoxc6P10629 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxc6P10629 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc6P10629 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc6P10629 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc6P10629 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxc6P10629 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc6P10629 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Gm7461-201ENSMUST00000058918 827 ntBASIC19.43■□□□□ 0.7
Hoxc6P10629 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc6P10629 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc6P10629 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Hoxc6P10629 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms