Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.62■□□□□ 0.41
Hoxa9P09631 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxa9P09631 Gm18101-201ENSMUST00000215769 548 ntBASIC17.62■□□□□ 0.41
Hoxa9P09631 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hoxa9P09631 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hoxa9P09631 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa9P09631 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa9P09631 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa9P09631 AA414768-201ENSMUST00000121924 1257 ntBASIC17.61■□□□□ 0.41
Hoxa9P09631 Gm16061-201ENSMUST00000122167 857 ntBASIC17.61■□□□□ 0.41
Hoxa9P09631 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.61■□□□□ 0.41
Hoxa9P09631 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hoxa9P09631 Gm7367-201ENSMUST00000057611 492 ntBASIC17.61■□□□□ 0.41
Hoxa9P09631 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa9P09631 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa9P09631 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hoxa9P09631 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.6■□□□□ 0.41
Hoxa9P09631 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.6■□□□□ 0.41
Hoxa9P09631 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.6■□□□□ 0.41
Hoxa9P09631 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa9P09631 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Hoxa9P09631 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hoxa9P09631 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Hoxa9P09631 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Gm13474-201ENSMUST00000122466 815 ntBASIC17.59■□□□□ 0.41
Hoxa9P09631 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
Hoxa9P09631 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.59■□□□□ 0.41
Hoxa9P09631 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.59■□□□□ 0.41
Hoxa9P09631 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa9P09631 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.58■□□□□ 0.41
Hoxa9P09631 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.58■□□□□ 0.41
Hoxa9P09631 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Hoxa9P09631 Tgds-204ENSMUST00000228543 1594 ntBASIC17.58■□□□□ 0.41
Hoxa9P09631 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.58■□□□□ 0.41
Hoxa9P09631 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxa9P09631 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxa9P09631 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxa9P09631 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hoxa9P09631 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hoxa9P09631 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Hoxa9P09631 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.58■□□□□ 0.4
Hoxa9P09631 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxa9P09631 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa9P09631 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa9P09631 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa9P09631 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.57■□□□□ 0.4
Hoxa9P09631 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa9P09631 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Gm22697-201ENSMUST00000175194 63 ntBASIC17.57■□□□□ 0.4
Hoxa9P09631 Gm6345-202ENSMUST00000180900 204 ntBASIC17.57■□□□□ 0.4
Hoxa9P09631 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms