Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.23□□□□□ -0.13
Pax1P09084 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pax1P09084 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pax1P09084 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pax1P09084 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.22□□□□□ -0.13
Pax1P09084 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.22□□□□□ -0.13
Pax1P09084 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pax1P09084 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.22□□□□□ -0.13
Pax1P09084 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.22□□□□□ -0.13
Pax1P09084 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pax1P09084 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Pax1P09084 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pax1P09084 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pax1P09084 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.22□□□□□ -0.13
Pax1P09084 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pax1P09084 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pax1P09084 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pax1P09084 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pax1P09084 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pax1P09084 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Pax1P09084 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pax1P09084 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.21□□□□□ -0.13
Pax1P09084 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.21□□□□□ -0.13
Pax1P09084 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.21□□□□□ -0.13
Pax1P09084 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.21□□□□□ -0.13
Pax1P09084 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pax1P09084 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pax1P09084 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pax1P09084 Gm13234-201ENSMUST00000120010 747 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.2□□□□□ -0.14
Pax1P09084 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pax1P09084 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pax1P09084 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pax1P09084 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pax1P09084 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.19□□□□□ -0.14
Pax1P09084 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pax1P09084 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms