Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr2aP08775 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr2aP08775 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr2aP08775 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.05■□□□□ 0.8
Polr2aP08775 Gm18206-201ENSMUST00000207027 926 ntBASIC20.05■□□□□ 0.8
Polr2aP08775 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr2aP08775 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr2aP08775 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Polr2aP08775 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Polr2aP08775 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Polr2aP08775 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Polr2aP08775 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Polr2aP08775 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr2aP08775 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.04■□□□□ 0.8
Polr2aP08775 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr2aP08775 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr2aP08775 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Polr2aP08775 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.04■□□□□ 0.8
Polr2aP08775 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Polr2aP08775 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.03■□□□□ 0.8
Polr2aP08775 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr2aP08775 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.03■□□□□ 0.8
Polr2aP08775 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.03■□□□□ 0.8
Polr2aP08775 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.03■□□□□ 0.8
Polr2aP08775 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Polr2aP08775 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.03■□□□□ 0.8
Polr2aP08775 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.03■□□□□ 0.8
Polr2aP08775 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr2aP08775 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.01■□□□□ 0.79
Polr2aP08775 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.01■□□□□ 0.79
Polr2aP08775 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr2aP08775 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr2aP08775 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr2aP08775 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr2aP08775 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Gm11336-201ENSMUST00000118168 334 ntBASIC20.01■□□□□ 0.79
Polr2aP08775 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr2aP08775 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Polr2aP08775 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20■□□□□ 0.79
Polr2aP08775 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr2aP08775 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20■□□□□ 0.79
Polr2aP08775 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Polr2aP08775 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.99■□□□□ 0.79
Polr2aP08775 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Polr2aP08775 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Polr2aP08775 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Gm12895-201ENSMUST00000122214 226 ntBASIC19.99■□□□□ 0.79
Polr2aP08775 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.99■□□□□ 0.79
Polr2aP08775 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.99■□□□□ 0.79
Polr2aP08775 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.99■□□□□ 0.79
Polr2aP08775 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr2aP08775 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.98■□□□□ 0.79
Polr2aP08775 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Polr2aP08775 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.98■□□□□ 0.79
Polr2aP08775 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Idnk-204ENSMUST00000226010 1898 ntBASIC19.98■□□□□ 0.79
Polr2aP08775 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr2aP08775 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr2aP08775 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr2aP08775 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Polr2aP08775 Mir5126-201ENSMUST00000175513 77 ntBASIC19.97■□□□□ 0.79
Polr2aP08775 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms