Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm2399-201ENSMUST00000104944 225 ntBASIC25.94■■□□□ 1.74
NefmP08553 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC25.94■■□□□ 1.74
NefmP08553 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NefmP08553 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.94■■□□□ 1.74
NefmP08553 Zfp783-201ENSMUST00000095946 670 ntBASIC25.94■■□□□ 1.74
NefmP08553 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
NefmP08553 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NefmP08553 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
NefmP08553 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NefmP08553 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NefmP08553 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
NefmP08553 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NefmP08553 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NefmP08553 Gm7291-201ENSMUST00000199147 382 ntBASIC25.93■■□□□ 1.74
NefmP08553 Gm6365-201ENSMUST00000054711 744 ntBASIC25.93■■□□□ 1.74
NefmP08553 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NefmP08553 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
NefmP08553 Gm42642-201ENSMUST00000200683 355 ntBASIC25.92■■□□□ 1.74
NefmP08553 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
NefmP08553 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NefmP08553 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.91■■□□□ 1.74
NefmP08553 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
NefmP08553 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
NefmP08553 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
NefmP08553 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
NefmP08553 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 AV356131-201ENSMUST00000206201 750 ntBASIC25.9■■□□□ 1.74
NefmP08553 Gm16401-202ENSMUST00000197463 2074 ntBASIC25.9■■□□□ 1.74
NefmP08553 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NefmP08553 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.89■■□□□ 1.74
NefmP08553 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NefmP08553 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NefmP08553 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
NefmP08553 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
NefmP08553 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC25.89■■□□□ 1.74
NefmP08553 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NefmP08553 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC25.89■■□□□ 1.74
NefmP08553 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC25.89■■□□□ 1.74
NefmP08553 Wnt10b-205ENSMUST00000226846 1204 ntBASIC25.89■■□□□ 1.74
NefmP08553 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NefmP08553 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
NefmP08553 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
NefmP08553 Haglr-201ENSMUST00000100000 2085 ntBASIC25.89■■□□□ 1.73
NefmP08553 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
NefmP08553 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
NefmP08553 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Gm37820-201ENSMUST00000194021 2147 ntBASIC25.88■■□□□ 1.73
NefmP08553 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
NefmP08553 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC25.88■■□□□ 1.73
NefmP08553 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Gm45774-201ENSMUST00000211992 2665 ntBASIC25.88■■□□□ 1.73
NefmP08553 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
NefmP08553 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NefmP08553 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC25.87■■□□□ 1.73
NefmP08553 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.87■■□□□ 1.73
NefmP08553 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC25.87■■□□□ 1.73
NefmP08553 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC25.87■■□□□ 1.73
NefmP08553 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
NefmP08553 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NefmP08553 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NefmP08553 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
NefmP08553 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NefmP08553 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NefmP08553 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms