Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sod1P08228 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sod1P08228 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.53■□□□□ 0.24
Sod1P08228 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.53■□□□□ 0.24
Sod1P08228 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.53■□□□□ 0.24
Sod1P08228 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sod1P08228 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sod1P08228 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sod1P08228 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sod1P08228 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sod1P08228 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.52■□□□□ 0.24
Sod1P08228 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.52■□□□□ 0.24
Sod1P08228 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.52■□□□□ 0.24
Sod1P08228 Gm18958-201ENSMUST00000174258 762 ntBASIC16.52■□□□□ 0.24
Sod1P08228 Gm28033-201ENSMUST00000184224 96 ntBASIC16.52■□□□□ 0.24
Sod1P08228 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.52■□□□□ 0.24
Sod1P08228 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sod1P08228 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.52■□□□□ 0.23
Sod1P08228 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sod1P08228 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.52■□□□□ 0.23
Sod1P08228 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.52■□□□□ 0.23
Sod1P08228 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Gm11950-201ENSMUST00000121615 838 ntBASIC16.51■□□□□ 0.23
Sod1P08228 Gm17807-201ENSMUST00000186869 298 ntBASIC16.51■□□□□ 0.23
Sod1P08228 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sod1P08228 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sod1P08228 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Sod1P08228 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sod1P08228 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Sod1P08228 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.5■□□□□ 0.23
Sod1P08228 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sod1P08228 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.49■□□□□ 0.23
Sod1P08228 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.49■□□□□ 0.23
Sod1P08228 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Sod1P08228 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sod1P08228 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sod1P08228 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.49■□□□□ 0.23
Sod1P08228 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.49■□□□□ 0.23
Sod1P08228 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.48■□□□□ 0.23
Sod1P08228 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Sod1P08228 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sod1P08228 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sod1P08228 Gm37722-201ENSMUST00000193757 208 ntBASIC16.48■□□□□ 0.23
Sod1P08228 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Sod1P08228 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sod1P08228 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms