Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.13□□□□□ -0.63
P06320 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.13□□□□□ -0.63
P06320 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P06320 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.12□□□□□ -0.63
P06320 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.12□□□□□ -0.63
P06320 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P06320 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.12□□□□□ -0.63
P06320 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P06320 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06320 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P06320 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06320 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.11□□□□□ -0.63
P06320 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P06320 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.11□□□□□ -0.63
P06320 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.11□□□□□ -0.63
P06320 Spcs1-204ENSMUST00000226782 949 ntBASIC11.11□□□□□ -0.63
P06320 Gm9959-201ENSMUST00000068277 390 ntBASIC11.11□□□□□ -0.63
P06320 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06320 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
P06320 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
P06320 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.11□□□□□ -0.63
P06320 Tgds-204ENSMUST00000228543 1594 ntBASIC11.11□□□□□ -0.63
P06320 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.11□□□□□ -0.63
P06320 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06320 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06320 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
P06320 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.1□□□□□ -0.63
P06320 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
P06320 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06320 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.1□□□□□ -0.63
P06320 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.1□□□□□ -0.63
P06320 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.1□□□□□ -0.63
P06320 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.1□□□□□ -0.63
P06320 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06320 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06320 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms