Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm27275-201ENSMUST00000184318 272 ntBASIC14.74□□□□□ -0.05
Cd74P04441 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cd74P04441 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.74□□□□□ -0.05
Cd74P04441 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.73□□□□□ -0.05
Cd74P04441 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.73□□□□□ -0.05
Cd74P04441 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cd74P04441 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cd74P04441 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.73□□□□□ -0.05
Cd74P04441 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cd74P04441 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.73□□□□□ -0.05
Cd74P04441 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cd74P04441 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd74P04441 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cd74P04441 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.72□□□□□ -0.05
Cd74P04441 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.72□□□□□ -0.05
Cd74P04441 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Haglr-201ENSMUST00000100000 2085 ntBASIC14.72□□□□□ -0.05
Cd74P04441 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.72□□□□□ -0.05
Cd74P04441 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cd74P04441 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cd74P04441 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd74P04441 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cd74P04441 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cd74P04441 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cd74P04441 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.71□□□□□ -0.05
Cd74P04441 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cd74P04441 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cd74P04441 Gm5643-201ENSMUST00000117081 966 ntBASIC14.71□□□□□ -0.05
Cd74P04441 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.71□□□□□ -0.05
Cd74P04441 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd74P04441 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cd74P04441 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cd74P04441 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Cd74P04441 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cd74P04441 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cd74P04441 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cd74P04441 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.7□□□□□ -0.06
Cd74P04441 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Cd74P04441 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Gm10252-201ENSMUST00000209541 832 ntBASIC14.7□□□□□ -0.06
Cd74P04441 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.7□□□□□ -0.06
Cd74P04441 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.7□□□□□ -0.06
Cd74P04441 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cd74P04441 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cd74P04441 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cd74P04441 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.69□□□□□ -0.06
Cd74P04441 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.69□□□□□ -0.06
Cd74P04441 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cd74P04441 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms