Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.42■□□□□ 0.06
P04224 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.42■□□□□ 0.06
P04224 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
P04224 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
P04224 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
P04224 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.41■□□□□ 0.06
P04224 Gm40848-201ENSMUST00000221998 324 ntBASIC15.41■□□□□ 0.06
P04224 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
P04224 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
P04224 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
P04224 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04224 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
P04224 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.4■□□□□ 0.06
P04224 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Gm12821-201ENSMUST00000120022 600 ntBASIC15.4■□□□□ 0.06
P04224 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.4■□□□□ 0.06
P04224 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
P04224 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
P04224 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04224 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.39■□□□□ 0.05
P04224 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
P04224 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.39■□□□□ 0.05
P04224 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
P04224 Gm26833-201ENSMUST00000180899 440 ntBASIC15.39■□□□□ 0.05
P04224 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.39■□□□□ 0.05
P04224 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.39■□□□□ 0.05
P04224 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
P04224 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.39■□□□□ 0.05
P04224 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
P04224 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P04224 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.38■□□□□ 0.05
P04224 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
P04224 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
P04224 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.38■□□□□ 0.05
P04224 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
P04224 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
P04224 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.38■□□□□ 0.05
P04224 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
P04224 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P04224 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms