Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.7□□□□□ -0.06
Hoxa3P02831 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.7□□□□□ -0.06
Hoxa3P02831 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.7□□□□□ -0.06
Hoxa3P02831 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.69□□□□□ -0.06
Hoxa3P02831 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hoxa3P02831 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hoxa3P02831 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hoxa3P02831 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Hoxa3P02831 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.69□□□□□ -0.06
Hoxa3P02831 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.69□□□□□ -0.06
Hoxa3P02831 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hoxa3P02831 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.69□□□□□ -0.06
Hoxa3P02831 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.69□□□□□ -0.06
Hoxa3P02831 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxa3P02831 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.68□□□□□ -0.06
Hoxa3P02831 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.68□□□□□ -0.06
Hoxa3P02831 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Gm5417-201ENSMUST00000079706 384 ntBASIC14.68□□□□□ -0.06
Hoxa3P02831 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxa3P02831 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxa3P02831 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Hoxa3P02831 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Gm21814-202ENSMUST00000203277 873 ntBASIC14.67□□□□□ -0.06
Hoxa3P02831 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxa3P02831 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Hoxa3P02831 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.66□□□□□ -0.06
Hoxa3P02831 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hoxa3P02831 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.66□□□□□ -0.06
Hoxa3P02831 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.66□□□□□ -0.06
Hoxa3P02831 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxa3P02831 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxa3P02831 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.65□□□□□ -0.06
Hoxa3P02831 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Gm12382-201ENSMUST00000122005 922 ntBASIC14.65□□□□□ -0.06
Hoxa3P02831 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms