Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hoxa7P02830 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.21■□□□□ 0.99
Hoxa7P02830 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.21■□□□□ 0.99
Hoxa7P02830 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.21■□□□□ 0.99
Hoxa7P02830 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Hoxa7P02830 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa7P02830 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Hoxa7P02830 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hoxa7P02830 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Gm24841-201ENSMUST00000158676 357 ntBASIC21.2■□□□□ 0.98
Hoxa7P02830 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hoxa7P02830 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Hoxa7P02830 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Hoxa7P02830 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Hoxa7P02830 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa7P02830 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Hoxa7P02830 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Gm10517-202ENSMUST00000192970 758 ntBASIC21.19■□□□□ 0.98
Hoxa7P02830 Gm37025-201ENSMUST00000195159 829 ntBASIC21.19■□□□□ 0.98
Hoxa7P02830 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.19■□□□□ 0.98
Hoxa7P02830 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa7P02830 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.18■□□□□ 0.98
Hoxa7P02830 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Hoxa7P02830 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hoxa7P02830 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxa7P02830 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.18■□□□□ 0.98
Hoxa7P02830 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.17■□□□□ 0.98
Hoxa7P02830 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.17■□□□□ 0.98
Hoxa7P02830 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.17■□□□□ 0.98
Hoxa7P02830 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.17■□□□□ 0.98
Hoxa7P02830 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.17■□□□□ 0.98
Hoxa7P02830 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa7P02830 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 Gm17661-201ENSMUST00000170317 270 ntBASIC21.16■□□□□ 0.98
Hoxa7P02830 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Hoxa7P02830 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa7P02830 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hoxa7P02830 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.15■□□□□ 0.98
Hoxa7P02830 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa7P02830 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxa7P02830 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxa7P02830 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxa7P02830 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.14■□□□□ 0.98
Hoxa7P02830 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Hoxa7P02830 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hoxa7P02830 Gm8520-201ENSMUST00000186517 868 ntBASIC21.14■□□□□ 0.97
Hoxa7P02830 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa7P02830 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa7P02830 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa7P02830 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms