Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01878 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P01878 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
P01878 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Gm14859-201ENSMUST00000117752 357 ntBASIC18.11■□□□□ 0.49
P01878 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.11■□□□□ 0.49
P01878 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.11■□□□□ 0.49
P01878 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
P01878 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01878 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.1■□□□□ 0.49
P01878 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
P01878 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.1■□□□□ 0.49
P01878 Gm27741-201ENSMUST00000185060 237 ntBASIC18.1■□□□□ 0.49
P01878 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.1■□□□□ 0.49
P01878 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
P01878 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01878 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
P01878 Actl10-202ENSMUST00000226583 1501 ntBASIC18.09■□□□□ 0.49
P01878 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.09■□□□□ 0.49
P01878 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Gm27704-201ENSMUST00000185094 107 ntBASIC18.09■□□□□ 0.49
P01878 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
P01878 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01878 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.09■□□□□ 0.49
P01878 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01878 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.08■□□□□ 0.49
P01878 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01878 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01878 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01878 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.08■□□□□ 0.48
P01878 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.08■□□□□ 0.48
P01878 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.08■□□□□ 0.48
P01878 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01878 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.07■□□□□ 0.48
P01878 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Gm17808-201ENSMUST00000200859 894 ntBASIC18.07■□□□□ 0.48
P01878 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
P01878 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P01878 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01878 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P01878 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
P01878 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.06■□□□□ 0.48
P01878 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Gm11355-201ENSMUST00000121120 306 ntBASIC18.06■□□□□ 0.48
P01878 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.06■□□□□ 0.48
P01878 Gm26039-201ENSMUST00000158152 144 ntBASIC18.06■□□□□ 0.48
P01878 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P01878 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.06■□□□□ 0.48
P01878 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.06■□□□□ 0.48
P01878 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01878 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms