Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Trmt13-210ENSMUST00000198454 880 ntBASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igh-VJ558P01758 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Gm18666-201ENSMUST00000190039 958 ntBASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Gm37292-201ENSMUST00000192062 758 ntBASIC15.16■□□□□ 0.02
Igh-VJ558P01758 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igh-VJ558P01758 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.15■□□□□ 0.02
Igh-VJ558P01758 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igh-VJ558P01758 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igh-VJ558P01758 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igh-VJ558P01758 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms