Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vti1aO89116 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.92■□□□□ 0.62
Vti1aO89116 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vti1aO89116 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.92■□□□□ 0.62
Vti1aO89116 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vti1aO89116 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vti1aO89116 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vti1aO89116 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.91■□□□□ 0.62
Vti1aO89116 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Vti1aO89116 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.91■□□□□ 0.62
Vti1aO89116 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vti1aO89116 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1aO89116 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Gm7889-201ENSMUST00000185591 958 ntBASIC18.9■□□□□ 0.62
Vti1aO89116 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.9■□□□□ 0.62
Vti1aO89116 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Gm3375-201ENSMUST00000203929 796 ntBASIC18.9■□□□□ 0.62
Vti1aO89116 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.9■□□□□ 0.62
Vti1aO89116 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1aO89116 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Vti1aO89116 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vti1aO89116 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.89■□□□□ 0.61
Vti1aO89116 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.89■□□□□ 0.61
Vti1aO89116 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Vti1aO89116 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 Tgds-204ENSMUST00000228543 1594 ntBASIC18.89■□□□□ 0.61
Vti1aO89116 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vti1aO89116 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vti1aO89116 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.88■□□□□ 0.61
Vti1aO89116 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.88■□□□□ 0.61
Vti1aO89116 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vti1aO89116 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.88■□□□□ 0.61
Vti1aO89116 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vti1aO89116 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vti1aO89116 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vti1aO89116 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vti1aO89116 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.87■□□□□ 0.61
Vti1aO89116 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vti1aO89116 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Vti1aO89116 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.87■□□□□ 0.61
Vti1aO89116 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vti1aO89116 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Vti1aO89116 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vti1aO89116 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Vti1aO89116 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms