Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.01■□□□□ 0.47
Syn1O88935 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Syn1O88935 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18■□□□□ 0.47
Syn1O88935 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Syn1O88935 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18■□□□□ 0.47
Syn1O88935 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Syn1O88935 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Olfr129-201ENSMUST00000122318 993 ntBASIC18■□□□□ 0.47
Syn1O88935 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18■□□□□ 0.47
Syn1O88935 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Syn1O88935 Gm45328-201ENSMUST00000210942 917 ntBASIC18■□□□□ 0.47
Syn1O88935 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Syn1O88935 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Syn1O88935 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.99■□□□□ 0.47
Syn1O88935 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.99■□□□□ 0.47
Syn1O88935 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.99■□□□□ 0.47
Syn1O88935 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Syn1O88935 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.99■□□□□ 0.47
Syn1O88935 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syn1O88935 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.98■□□□□ 0.47
Syn1O88935 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Gm24841-201ENSMUST00000158676 357 ntBASIC17.98■□□□□ 0.47
Syn1O88935 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.98■□□□□ 0.47
Syn1O88935 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Syn1O88935 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Syn1O88935 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.97■□□□□ 0.47
Syn1O88935 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.97■□□□□ 0.47
Syn1O88935 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Syn1O88935 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.97■□□□□ 0.47
Syn1O88935 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.97■□□□□ 0.47
Syn1O88935 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Gm10566-201ENSMUST00000086739 996 ntBASIC17.97■□□□□ 0.47
Syn1O88935 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Syn1O88935 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Syn1O88935 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.96■□□□□ 0.47
Syn1O88935 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.96■□□□□ 0.47
Syn1O88935 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.96■□□□□ 0.47
Syn1O88935 Gm18195-201ENSMUST00000207604 706 ntBASIC17.96■□□□□ 0.47
Syn1O88935 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Syn1O88935 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Syn1O88935 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms