Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.68■□□□□ 0.1
Hdac3O88895 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Hdac3O88895 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.68■□□□□ 0.1
Hdac3O88895 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hdac3O88895 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.68■□□□□ 0.1
Hdac3O88895 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hdac3O88895 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac3O88895 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hdac3O88895 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hdac3O88895 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.67■□□□□ 0.1
Hdac3O88895 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac3O88895 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hdac3O88895 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.66■□□□□ 0.1
Hdac3O88895 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.66■□□□□ 0.1
Hdac3O88895 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.66■□□□□ 0.1
Hdac3O88895 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac3O88895 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.65■□□□□ 0.1
Hdac3O88895 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
Hdac3O88895 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.65■□□□□ 0.1
Hdac3O88895 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac3O88895 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.65■□□□□ 0.1
Hdac3O88895 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Hdac3O88895 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hdac3O88895 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hdac3O88895 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hdac3O88895 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.64■□□□□ 0.09
Hdac3O88895 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hdac3O88895 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.64■□□□□ 0.09
Hdac3O88895 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Hdac3O88895 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hdac3O88895 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.63■□□□□ 0.09
Hdac3O88895 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.63■□□□□ 0.09
Hdac3O88895 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Gm2399-201ENSMUST00000104944 225 ntBASIC15.63■□□□□ 0.09
Hdac3O88895 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hdac3O88895 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.63■□□□□ 0.09
Hdac3O88895 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms