Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apba3O88888 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apba3O88888 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apba3O88888 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apba3O88888 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apba3O88888 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Apba3O88888 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Apba3O88888 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.19■□□□□ 0.66
Apba3O88888 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.19■□□□□ 0.66
Apba3O88888 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.19■□□□□ 0.66
Apba3O88888 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.19■□□□□ 0.66
Apba3O88888 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apba3O88888 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Apba3O88888 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.18■□□□□ 0.66
Apba3O88888 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.18■□□□□ 0.66
Apba3O88888 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apba3O88888 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Apba3O88888 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
Apba3O88888 Gm18959-201ENSMUST00000208954 655 ntBASIC19.17■□□□□ 0.66
Apba3O88888 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.17■□□□□ 0.66
Apba3O88888 Gm7791-201ENSMUST00000219066 539 ntBASIC19.17■□□□□ 0.66
Apba3O88888 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Apba3O88888 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apba3O88888 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Apba3O88888 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.16■□□□□ 0.66
Apba3O88888 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Apba3O88888 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Apba3O88888 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Apba3O88888 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.16■□□□□ 0.66
Apba3O88888 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apba3O88888 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.15■□□□□ 0.66
Apba3O88888 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apba3O88888 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Apba3O88888 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Apba3O88888 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apba3O88888 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.13■□□□□ 0.65
Apba3O88888 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Apba3O88888 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Gm2274-201ENSMUST00000184539 609 ntBASIC19.13■□□□□ 0.65
Apba3O88888 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Apba3O88888 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apba3O88888 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apba3O88888 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apba3O88888 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms