Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Gm6576-201ENSMUST00000169678 883 ntBASIC17.91■□□□□ 0.46
ShdO88834 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.91■□□□□ 0.46
ShdO88834 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ShdO88834 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.91■□□□□ 0.46
ShdO88834 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ShdO88834 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ShdO88834 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ShdO88834 Gm11643-201ENSMUST00000119578 864 ntBASIC17.9■□□□□ 0.46
ShdO88834 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.9■□□□□ 0.46
ShdO88834 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.9■□□□□ 0.46
ShdO88834 Gm37292-201ENSMUST00000192062 758 ntBASIC17.9■□□□□ 0.46
ShdO88834 Gm8969-201ENSMUST00000199694 526 ntBASIC17.9■□□□□ 0.46
ShdO88834 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.9■□□□□ 0.46
ShdO88834 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ShdO88834 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ShdO88834 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.9■□□□□ 0.46
ShdO88834 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShdO88834 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ShdO88834 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ShdO88834 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.89■□□□□ 0.45
ShdO88834 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.89■□□□□ 0.45
ShdO88834 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Gm10698-201ENSMUST00000182663 604 ntBASIC17.89■□□□□ 0.45
ShdO88834 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.89■□□□□ 0.45
ShdO88834 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
ShdO88834 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShdO88834 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.89■□□□□ 0.45
ShdO88834 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ShdO88834 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ShdO88834 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ShdO88834 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShdO88834 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ShdO88834 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.87■□□□□ 0.45
ShdO88834 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.87■□□□□ 0.45
ShdO88834 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ShdO88834 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShdO88834 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms