Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.8■□□□□ 0.28
Hcn3O88705 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Hcn3O88705 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.79■□□□□ 0.28
Hcn3O88705 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hcn3O88705 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcn3O88705 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.79■□□□□ 0.28
Hcn3O88705 Gm10033-202ENSMUST00000211874 928 ntBASIC16.79■□□□□ 0.28
Hcn3O88705 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn3O88705 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcn3O88705 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hcn3O88705 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hcn3O88705 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Hcn3O88705 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.78■□□□□ 0.28
Hcn3O88705 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.78■□□□□ 0.28
Hcn3O88705 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.78■□□□□ 0.28
Hcn3O88705 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.78■□□□□ 0.28
Hcn3O88705 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hcn3O88705 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hcn3O88705 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn3O88705 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hcn3O88705 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hcn3O88705 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Hcn3O88705 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Hcn3O88705 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.77■□□□□ 0.28
Hcn3O88705 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn3O88705 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hcn3O88705 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Hcn3O88705 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn3O88705 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.76■□□□□ 0.27
Hcn3O88705 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Gm13146-201ENSMUST00000118508 780 ntBASIC16.76■□□□□ 0.27
Hcn3O88705 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.76■□□□□ 0.27
Hcn3O88705 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.76■□□□□ 0.27
Hcn3O88705 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hcn3O88705 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn3O88705 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hcn3O88705 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hcn3O88705 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.75■□□□□ 0.27
Hcn3O88705 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn3O88705 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms