Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Becn1O88597 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Becn1O88597 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Becn1O88597 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Becn1O88597 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn1O88597 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.07■□□□□ 0.8
Becn1O88597 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Becn1O88597 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn1O88597 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn1O88597 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn1O88597 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn1O88597 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.07■□□□□ 0.8
Becn1O88597 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.06■□□□□ 0.8
Becn1O88597 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.06■□□□□ 0.8
Becn1O88597 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.06■□□□□ 0.8
Becn1O88597 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.06■□□□□ 0.8
Becn1O88597 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Becn1O88597 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Becn1O88597 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn1O88597 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.05■□□□□ 0.8
Becn1O88597 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Becn1O88597 Gm18284-201ENSMUST00000172604 624 ntBASIC20.04■□□□□ 0.8
Becn1O88597 Gm27801-201ENSMUST00000184174 223 ntBASIC20.04■□□□□ 0.8
Becn1O88597 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.04■□□□□ 0.8
Becn1O88597 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.04■□□□□ 0.8
Becn1O88597 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn1O88597 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.03■□□□□ 0.8
Becn1O88597 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.03■□□□□ 0.8
Becn1O88597 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Becn1O88597 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.03■□□□□ 0.8
Becn1O88597 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Becn1O88597 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.03■□□□□ 0.8
Becn1O88597 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn1O88597 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Becn1O88597 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms