Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Capns1O88456 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Capns1O88456 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.21■□□□□ 0.19
Capns1O88456 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.21■□□□□ 0.19
Capns1O88456 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.21■□□□□ 0.19
Capns1O88456 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Capns1O88456 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Capns1O88456 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Capns1O88456 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.2■□□□□ 0.18
Capns1O88456 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Capns1O88456 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Capns1O88456 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Capns1O88456 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Capns1O88456 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.2■□□□□ 0.18
Capns1O88456 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Capns1O88456 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Capns1O88456 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Capns1O88456 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Capns1O88456 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.19■□□□□ 0.18
Capns1O88456 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
Capns1O88456 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Capns1O88456 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Capns1O88456 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Capns1O88456 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.18■□□□□ 0.18
Capns1O88456 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.18■□□□□ 0.18
Capns1O88456 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.18■□□□□ 0.18
Capns1O88456 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.18■□□□□ 0.18
Capns1O88456 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Capns1O88456 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capns1O88456 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.17■□□□□ 0.18
Capns1O88456 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Capns1O88456 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.17■□□□□ 0.18
Capns1O88456 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.17■□□□□ 0.18
Capns1O88456 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Capns1O88456 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Capns1O88456 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Capns1O88456 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capns1O88456 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Capns1O88456 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms