Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcr3O88410 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cxcr3O88410 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cxcr3O88410 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.61■□□□□ 0.41
Cxcr3O88410 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.61■□□□□ 0.41
Cxcr3O88410 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcr3O88410 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.6■□□□□ 0.41
Cxcr3O88410 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cxcr3O88410 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cxcr3O88410 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.6■□□□□ 0.41
Cxcr3O88410 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.6■□□□□ 0.41
Cxcr3O88410 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cxcr3O88410 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.6■□□□□ 0.41
Cxcr3O88410 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcr3O88410 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.59■□□□□ 0.41
Cxcr3O88410 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.59■□□□□ 0.41
Cxcr3O88410 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcr3O88410 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cxcr3O88410 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcr3O88410 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cxcr3O88410 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Gm10517-202ENSMUST00000192970 758 ntBASIC17.58■□□□□ 0.4
Cxcr3O88410 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cxcr3O88410 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcr3O88410 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cxcr3O88410 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.57■□□□□ 0.4
Cxcr3O88410 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cxcr3O88410 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cxcr3O88410 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcr3O88410 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.57■□□□□ 0.4
Cxcr3O88410 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcr3O88410 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.56■□□□□ 0.4
Cxcr3O88410 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcr3O88410 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcr3O88410 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms