Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Gm13148-201ENSMUST00000118892 745 ntBASIC10.7□□□□□ -0.7
Gm10139O88245 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Gm10139O88245 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.7□□□□□ -0.7
Gm10139O88245 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Gm10139O88245 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Gm10139O88245 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm10139O88245 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm10139O88245 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Gm10139O88245 Gm13401-201ENSMUST00000117074 291 ntBASIC10.69□□□□□ -0.7
Gm10139O88245 Gm11927-201ENSMUST00000118472 759 ntBASIC10.69□□□□□ -0.7
Gm10139O88245 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm10139O88245 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.69□□□□□ -0.7
Gm10139O88245 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.69□□□□□ -0.7
Gm10139O88245 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm10139O88245 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Gm45244-201ENSMUST00000211328 2200 ntBASIC10.69□□□□□ -0.7
Gm10139O88245 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm10139O88245 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm10139O88245 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm10139O88245 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10139O88245 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.68□□□□□ -0.7
Gm10139O88245 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm10139O88245 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.68□□□□□ -0.7
Gm10139O88245 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Gm10139O88245 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm10139O88245 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Gm10139O88245 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm10139O88245 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10139O88245 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms