Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ldb2O55203 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Gm13168-201ENSMUST00000121771 632 ntBASIC17.44■□□□□ 0.38
Ldb2O55203 Gm15378-201ENSMUST00000121894 207 ntBASIC17.44■□□□□ 0.38
Ldb2O55203 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.44■□□□□ 0.38
Ldb2O55203 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Ldb2O55203 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.44■□□□□ 0.38
Ldb2O55203 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ldb2O55203 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ldb2O55203 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.43■□□□□ 0.38
Ldb2O55203 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ldb2O55203 Gm12382-201ENSMUST00000122005 922 ntBASIC17.43■□□□□ 0.38
Ldb2O55203 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.43■□□□□ 0.38
Ldb2O55203 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb2O55203 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.42■□□□□ 0.38
Ldb2O55203 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Gm22240-201ENSMUST00000175225 82 ntBASIC17.42■□□□□ 0.38
Ldb2O55203 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ldb2O55203 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb2O55203 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.41■□□□□ 0.38
Ldb2O55203 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.41■□□□□ 0.38
Ldb2O55203 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.41■□□□□ 0.38
Ldb2O55203 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.41■□□□□ 0.38
Ldb2O55203 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ldb2O55203 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Ldb2O55203 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ldb2O55203 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.4■□□□□ 0.38
Ldb2O55203 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ldb2O55203 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ldb2O55203 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.4■□□□□ 0.38
Ldb2O55203 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.4■□□□□ 0.38
Ldb2O55203 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.4■□□□□ 0.38
Ldb2O55203 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ldb2O55203 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ldb2O55203 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ldb2O55203 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Ldb2O55203 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ldb2O55203 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ldb2O55203 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ldb2O55203 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Ldb2O55203 Gm8520-201ENSMUST00000186517 868 ntBASIC17.39■□□□□ 0.37
Ldb2O55203 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms