Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Iqck-206ENSMUST00000208658 2891 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm26039-201ENSMUST00000158152 144 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm17971-201ENSMUST00000190239 806 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm10566-201ENSMUST00000086739 996 ntBASIC19.34■□□□□ 0.69
Trdmt1O55055 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdmt1O55055 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.34■□□□□ 0.69
Trdmt1O55055 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.33■□□□□ 0.69
Trdmt1O55055 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trdmt1O55055 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.33■□□□□ 0.69
Trdmt1O55055 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trdmt1O55055 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trdmt1O55055 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trdmt1O55055 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trdmt1O55055 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdmt1O55055 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trdmt1O55055 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.32■□□□□ 0.68
Trdmt1O55055 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdmt1O55055 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trdmt1O55055 Idnk-204ENSMUST00000226010 1898 ntBASIC19.31■□□□□ 0.68
Trdmt1O55055 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdmt1O55055 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trdmt1O55055 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trdmt1O55055 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trdmt1O55055 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.31■□□□□ 0.68
Trdmt1O55055 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trdmt1O55055 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.31■□□□□ 0.68
Trdmt1O55055 Gm28033-201ENSMUST00000184224 96 ntBASIC19.31■□□□□ 0.68
Trdmt1O55055 Gm17807-201ENSMUST00000186869 298 ntBASIC19.31■□□□□ 0.68
Trdmt1O55055 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdmt1O55055 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Trdmt1O55055 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trdmt1O55055 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Trdmt1O55055 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.3■□□□□ 0.68
Trdmt1O55055 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trdmt1O55055 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.3■□□□□ 0.68
Trdmt1O55055 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trdmt1O55055 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trdmt1O55055 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trdmt1O55055 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.29■□□□□ 0.68
Trdmt1O55055 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.29■□□□□ 0.68
Trdmt1O55055 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.29■□□□□ 0.68
Trdmt1O55055 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trdmt1O55055 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trdmt1O55055 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trdmt1O55055 Actl10-202ENSMUST00000226583 1501 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms