Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Per2O54943 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.29■□□□□ 0.52
Per2O54943 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Per2O54943 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.28■□□□□ 0.52
Per2O54943 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Gm11249-201ENSMUST00000117071 859 ntBASIC18.28■□□□□ 0.52
Per2O54943 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.28■□□□□ 0.52
Per2O54943 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per2O54943 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Per2O54943 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Gm15375-201ENSMUST00000119510 849 ntBASIC18.27■□□□□ 0.52
Per2O54943 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.27■□□□□ 0.52
Per2O54943 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per2O54943 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Per2O54943 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Per2O54943 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Per2O54943 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.26■□□□□ 0.51
Per2O54943 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.26■□□□□ 0.51
Per2O54943 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.26■□□□□ 0.51
Per2O54943 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.26■□□□□ 0.51
Per2O54943 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Per2O54943 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Per2O54943 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.26■□□□□ 0.51
Per2O54943 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Gm11643-201ENSMUST00000119578 864 ntBASIC18.25■□□□□ 0.51
Per2O54943 Gm12441-201ENSMUST00000121806 588 ntBASIC18.25■□□□□ 0.51
Per2O54943 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Mir8112-201ENSMUST00000184382 131 ntBASIC18.25■□□□□ 0.51
Per2O54943 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.25■□□□□ 0.51
Per2O54943 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Per2O54943 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Per2O54943 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.25■□□□□ 0.51
Per2O54943 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.24■□□□□ 0.51
Per2O54943 Gm13158-201ENSMUST00000122007 736 ntBASIC18.24■□□□□ 0.51
Per2O54943 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.24■□□□□ 0.51
Per2O54943 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.24■□□□□ 0.51
Per2O54943 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Per2O54943 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Per2O54943 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.23■□□□□ 0.51
Per2O54943 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Per2O54943 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Gm13401-201ENSMUST00000117074 291 ntBASIC18.23■□□□□ 0.51
Per2O54943 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Per2O54943 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Gm20049-201ENSMUST00000219950 730 ntBASIC18.23■□□□□ 0.51
Per2O54943 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.23■□□□□ 0.51
Per2O54943 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Per2O54943 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Per2O54943 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Per2O54943 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms