Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.87■□□□□ 0.93
Smarce1O54941 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Smarce1O54941 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smarce1O54941 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smarce1O54941 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarce1O54941 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarce1O54941 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.85■□□□□ 0.93
Smarce1O54941 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarce1O54941 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Smarce1O54941 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smarce1O54941 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarce1O54941 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Smarce1O54941 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.84■□□□□ 0.93
Smarce1O54941 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Gm18284-201ENSMUST00000172604 624 ntBASIC20.84■□□□□ 0.93
Smarce1O54941 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarce1O54941 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Smarce1O54941 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Smarce1O54941 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.83■□□□□ 0.93
Smarce1O54941 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Smarce1O54941 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.83■□□□□ 0.93
Smarce1O54941 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarce1O54941 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarce1O54941 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarce1O54941 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarce1O54941 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarce1O54941 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Smarce1O54941 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.82■□□□□ 0.92
Smarce1O54941 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smarce1O54941 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.82■□□□□ 0.92
Smarce1O54941 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smarce1O54941 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarce1O54941 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.81■□□□□ 0.92
Smarce1O54941 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smarce1O54941 Gm26571-201ENSMUST00000181399 666 ntBASIC20.81■□□□□ 0.92
Smarce1O54941 Gm42569-201ENSMUST00000200539 472 ntBASIC20.81■□□□□ 0.92
Smarce1O54941 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarce1O54941 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Smarce1O54941 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smarce1O54941 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms