Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.51■□□□□ 0.23
Abca4O35600 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Abca4O35600 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.5■□□□□ 0.23
Abca4O35600 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.5■□□□□ 0.23
Abca4O35600 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Abca4O35600 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.5■□□□□ 0.23
Abca4O35600 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.5■□□□□ 0.23
Abca4O35600 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca4O35600 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Abca4O35600 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.49■□□□□ 0.23
Abca4O35600 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.49■□□□□ 0.23
Abca4O35600 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Abca4O35600 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.49■□□□□ 0.23
Abca4O35600 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Abca4O35600 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.49■□□□□ 0.23
Abca4O35600 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abca4O35600 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Abca4O35600 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.48■□□□□ 0.23
Abca4O35600 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.48■□□□□ 0.23
Abca4O35600 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Abca4O35600 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Abca4O35600 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Gm9727-201ENSMUST00000161387 555 ntBASIC16.48■□□□□ 0.23
Abca4O35600 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Abca4O35600 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca4O35600 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abca4O35600 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abca4O35600 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Abca4O35600 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.47■□□□□ 0.23
Abca4O35600 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Abca4O35600 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.47■□□□□ 0.23
Abca4O35600 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.47■□□□□ 0.23
Abca4O35600 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca4O35600 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Gm27867-201ENSMUST00000184778 125 ntBASIC16.46■□□□□ 0.23
Abca4O35600 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.46■□□□□ 0.23
Abca4O35600 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Abca4O35600 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Abca4O35600 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abca4O35600 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Abca4O35600 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Abca4O35600 Gm12260-201ENSMUST00000122447 411 ntBASIC16.45■□□□□ 0.22
Abca4O35600 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.45■□□□□ 0.22
Abca4O35600 Gm27397-201ENSMUST00000184997 107 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms