Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Mir8112-201ENSMUST00000184382 131 ntBASIC19.75■□□□□ 0.75
Stx1aO35526 Gm29791-202ENSMUST00000207888 369 ntBASIC19.75■□□□□ 0.75
Stx1aO35526 Gm7514-201ENSMUST00000209475 934 ntBASIC19.75■□□□□ 0.75
Stx1aO35526 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.75■□□□□ 0.75
Stx1aO35526 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Stx1aO35526 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stx1aO35526 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Stx1aO35526 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.74■□□□□ 0.75
Stx1aO35526 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Stx1aO35526 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Stx1aO35526 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stx1aO35526 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.73■□□□□ 0.75
Stx1aO35526 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.73■□□□□ 0.75
Stx1aO35526 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.73■□□□□ 0.75
Stx1aO35526 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.73■□□□□ 0.75
Stx1aO35526 Gm10493-201ENSMUST00000097270 612 ntBASIC19.73■□□□□ 0.75
Stx1aO35526 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stx1aO35526 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stx1aO35526 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Stx1aO35526 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Stx1aO35526 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stx1aO35526 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stx1aO35526 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stx1aO35526 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.72■□□□□ 0.75
Stx1aO35526 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Stx1aO35526 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Stx1aO35526 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Stx1aO35526 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.72■□□□□ 0.75
Stx1aO35526 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Stx1aO35526 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.72■□□□□ 0.75
Stx1aO35526 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stx1aO35526 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stx1aO35526 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Stx1aO35526 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
Stx1aO35526 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.71■□□□□ 0.75
Stx1aO35526 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.71■□□□□ 0.75
Stx1aO35526 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stx1aO35526 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stx1aO35526 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stx1aO35526 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.7■□□□□ 0.74
Stx1aO35526 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.7■□□□□ 0.74
Stx1aO35526 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Stx1aO35526 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.7■□□□□ 0.74
Stx1aO35526 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.7■□□□□ 0.74
Stx1aO35526 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.7■□□□□ 0.74
Stx1aO35526 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Stx1aO35526 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Stx1aO35526 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Haglr-201ENSMUST00000100000 2085 ntBASIC19.69■□□□□ 0.74
Stx1aO35526 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.69■□□□□ 0.74
Stx1aO35526 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Stx1aO35526 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.69■□□□□ 0.74
Stx1aO35526 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stx1aO35526 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Gm38285-201ENSMUST00000192928 922 ntBASIC19.68■□□□□ 0.74
Stx1aO35526 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms