Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcn6O35454 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 Gm13744-201ENSMUST00000118953 850 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC18.61■□□□□ 0.57
Clcn6O35454 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcn6O35454 Gm28766-201ENSMUST00000191086 234 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Gm43811-201ENSMUST00000202862 695 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.61■□□□□ 0.57
Clcn6O35454 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.61■□□□□ 0.57
Clcn6O35454 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.61■□□□□ 0.57
Clcn6O35454 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
Clcn6O35454 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.6■□□□□ 0.57
Clcn6O35454 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.6■□□□□ 0.57
Clcn6O35454 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn6O35454 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.59■□□□□ 0.57
Clcn6O35454 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clcn6O35454 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clcn6O35454 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clcn6O35454 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.59■□□□□ 0.57
Clcn6O35454 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Clcn6O35454 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clcn6O35454 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.59■□□□□ 0.57
Clcn6O35454 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.59■□□□□ 0.57
Clcn6O35454 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn6O35454 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.58■□□□□ 0.57
Clcn6O35454 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn6O35454 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.58■□□□□ 0.56
Clcn6O35454 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Clcn6O35454 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Gm10478-201ENSMUST00000084451 396 ntBASIC18.58■□□□□ 0.56
Clcn6O35454 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Clcn6O35454 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.58■□□□□ 0.56
Clcn6O35454 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn6O35454 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.57■□□□□ 0.56
Clcn6O35454 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Clcn6O35454 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clcn6O35454 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms