Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Tnfsf11O35235 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfsf11O35235 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfsf11O35235 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfsf11O35235 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.7□□□□□ -0.22
Tnfsf11O35235 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.7□□□□□ -0.22
Tnfsf11O35235 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Idnk-204ENSMUST00000226010 1898 ntBASIC13.7□□□□□ -0.22
Tnfsf11O35235 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf11O35235 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfsf11O35235 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.68□□□□□ -0.22
Tnfsf11O35235 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfsf11O35235 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.67□□□□□ -0.22
Tnfsf11O35235 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms