Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.12□□□□□ -0.15
Ndufb11O09111 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Gm9870-201ENSMUST00000063874 645 ntBASIC14.12□□□□□ -0.15
Ndufb11O09111 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.12□□□□□ -0.15
Ndufb11O09111 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ndufb11O09111 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.12□□□□□ -0.15
Ndufb11O09111 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Ndufb11O09111 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ndufb11O09111 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb11O09111 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ndufb11O09111 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.11□□□□□ -0.15
Ndufb11O09111 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.11□□□□□ -0.15
Ndufb11O09111 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ndufb11O09111 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ndufb11O09111 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ndufb11O09111 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb11O09111 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
Ndufb11O09111 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb11O09111 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ndufb11O09111 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ndufb11O09111 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.09□□□□□ -0.15
Ndufb11O09111 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.09□□□□□ -0.15
Ndufb11O09111 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.09□□□□□ -0.15
Ndufb11O09111 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb11O09111 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ndufb11O09111 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndufb11O09111 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndufb11O09111 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndufb11O09111 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ndufb11O09111 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Idnk-204ENSMUST00000226010 1898 ntBASIC14.08□□□□□ -0.16
Ndufb11O09111 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.08□□□□□ -0.16
Ndufb11O09111 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ndufb11O09111 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ndufb11O09111 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndufb11O09111 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb11O09111 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms