Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Gm21362-201ENSMUST00000194272 928 ntBASIC18.18■□□□□ 0.5
Ebf3O08791 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ebf3O08791 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 Gm10517-202ENSMUST00000192970 758 ntBASIC18.17■□□□□ 0.5
Ebf3O08791 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.17■□□□□ 0.5
Ebf3O08791 Gm18959-201ENSMUST00000208954 655 ntBASIC18.17■□□□□ 0.5
Ebf3O08791 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ebf3O08791 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ebf3O08791 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.17■□□□□ 0.5
Ebf3O08791 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf3O08791 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.16■□□□□ 0.5
Ebf3O08791 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.16■□□□□ 0.5
Ebf3O08791 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf3O08791 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ebf3O08791 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf3O08791 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf3O08791 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.16■□□□□ 0.5
Ebf3O08791 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.16■□□□□ 0.5
Ebf3O08791 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf3O08791 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf3O08791 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ebf3O08791 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Ebf3O08791 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf3O08791 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.15■□□□□ 0.5
Ebf3O08791 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.15■□□□□ 0.5
Ebf3O08791 Gm10819-201ENSMUST00000099988 561 ntBASIC18.15■□□□□ 0.5
Ebf3O08791 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf3O08791 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf3O08791 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf3O08791 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ebf3O08791 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Ebf3O08791 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf3O08791 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ebf3O08791 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ebf3O08791 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ebf3O08791 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.14■□□□□ 0.49
Ebf3O08791 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.14■□□□□ 0.49
Ebf3O08791 Gm27463-201ENSMUST00000183569 57 ntBASIC18.14■□□□□ 0.49
Ebf3O08791 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Gm7367-201ENSMUST00000057611 492 ntBASIC18.14■□□□□ 0.49
Ebf3O08791 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.14■□□□□ 0.49
Ebf3O08791 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf3O08791 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.14■□□□□ 0.49
Ebf3O08791 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.14■□□□□ 0.49
Ebf3O08791 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ebf3O08791 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
Ebf3O08791 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ebf3O08791 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Ebf3O08791 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ebf3O08791 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf3O08791 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ebf3O08791 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms