Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11bO08712 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf11bO08712 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11bO08712 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Gm13401-201ENSMUST00000117074 291 ntBASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Gm4968-201ENSMUST00000071458 858 ntBASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11bO08712 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Gm2559-201ENSMUST00000201323 363 ntBASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11bO08712 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11bO08712 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11bO08712 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11bO08712 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11bO08712 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms