Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AlyrefO08583 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
AlyrefO08583 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AlyrefO08583 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AlyrefO08583 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.69■□□□□ 0.42
AlyrefO08583 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AlyrefO08583 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
AlyrefO08583 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AlyrefO08583 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.68■□□□□ 0.42
AlyrefO08583 Gm13474-201ENSMUST00000122466 815 ntBASIC17.68■□□□□ 0.42
AlyrefO08583 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.68■□□□□ 0.42
AlyrefO08583 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.68■□□□□ 0.42
AlyrefO08583 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
AlyrefO08583 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.68■□□□□ 0.42
AlyrefO08583 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AlyrefO08583 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.67■□□□□ 0.42
AlyrefO08583 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.67■□□□□ 0.42
AlyrefO08583 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.67■□□□□ 0.42
AlyrefO08583 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AlyrefO08583 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AlyrefO08583 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.66■□□□□ 0.42
AlyrefO08583 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AlyrefO08583 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.66■□□□□ 0.42
AlyrefO08583 Gm38027-201ENSMUST00000192315 235 ntBASIC17.66■□□□□ 0.42
AlyrefO08583 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.66■□□□□ 0.42
AlyrefO08583 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.66■□□□□ 0.42
AlyrefO08583 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.66■□□□□ 0.42
AlyrefO08583 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AlyrefO08583 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.66■□□□□ 0.42
AlyrefO08583 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AlyrefO08583 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.65■□□□□ 0.42
AlyrefO08583 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.65■□□□□ 0.42
AlyrefO08583 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.65■□□□□ 0.42
AlyrefO08583 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
AlyrefO08583 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
AlyrefO08583 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AlyrefO08583 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AlyrefO08583 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AlyrefO08583 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AlyrefO08583 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.64■□□□□ 0.41
AlyrefO08583 Gm2651-201ENSMUST00000203560 838 ntBASIC17.64■□□□□ 0.41
AlyrefO08583 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.64■□□□□ 0.41
AlyrefO08583 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.64■□□□□ 0.41
AlyrefO08583 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.64■□□□□ 0.41
AlyrefO08583 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AlyrefO08583 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AlyrefO08583 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AlyrefO08583 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AlyrefO08583 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.63■□□□□ 0.41
AlyrefO08583 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AlyrefO08583 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
AlyrefO08583 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AlyrefO08583 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AlyrefO08583 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AlyrefO08583 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms